Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015894381.1_cds_XP_016447527.1_42278
CDS Infomation

[gene=LOC107772540] [db_xref=GeneID:107772540] [protein=uncharacterized protein LOC107772540] [protein_id=XP_016447527.1] [location=complement(join(29779..30078,30175..30325,30410..30653,30757..30967,31043..31239,31326..31433,31530..32810,35070..35364,35465..35615,35699..35942,36047..36257,36332..36528,36615..36722,36819..38094))] [gbkey=CDS]
Sequence

ATGAAATTAAGCACTAGAAAGATACTTCTATTTCGAGTTGTTCTTGTTCTGGTTTTTTAC
ATAGCAAATGCTTCAGACACCATTAGCACCAATAAATCCCTGCAAGATTCAGAAACTTTA
GTCTCCAATGACAAAAGATTCATATTTGGGTTCTTTAGTCCAGAAAATTCAACGAATCGG
TATGTTGGTATTATGTTTAATATCCAATCATCAACTGTTGTATGGGTAGCCAACAGAGAC
AACCCTTTACAAGATTCTAGTGGAAGTGTTACAATATCAGAAGACGGAAATCTTGTAATC
TTGAATGCACAGAAGAAAAGTATATGGTCATCCAATATTTCAACAGCTGTGAGAAATTCT
ACTGCCCAGCTCTTGGATAATGGGAACTTAGAATTGAAAGACAGCTCCAGTGGGATGGTC
CTCTGGGAAAGTTTCCGCGATCCTTCAGATTCCTTCTTGCAGTATATGAAAATTGGCGTC
GATAAGAGTACTAACACAACAAATCTGCTGAAATCATGGAAAAGTCCTTCGGATCCATCT
GCTGGGAGTTTCTCAGCTGGTATTCAACCTGAAACGGTTCCCCAGATTTACATATGGAAA
AATGGGAGACTCCCTCATTGGCGTAGCGGTCCGTGGAATAAACAGATTTTCATTGGAATA
CCAGACATGACTTCTTTCTACCTCAATGGATTTGATCTAGTAAATGACAACAAGGGAACT
GCATACCTCTCCTTTTTATACGCAAATCAGGCTGAGATTGCCTATTTCACCTTGAACTCA
ACAGGGTTTTTGCATCAGAAATATTTGGATCCTAAGAAGAATGATTGGGAAGTGACATGG
GAAAGTCAGGTAAGCGAGTGCGATTTTTATGGAAAATGTGGGCCTTTTGGAAGCTGTGAT
CCTAGAAGCTCACCAATCTGTTCTTGTTTAGATGGATTTAAGCCGAAAAGTGAAGAGGAA
TGGAGGAAAGGAAATTGGACTGGTGGATGTCTCAGAAAGTCCATGTTAGAGAGTGAAAGA
AACAACTCTAACATTGAGCAAGGTAAGCAAGATTGGTTTCTGAAGCTGCAGTCAATGAAA
GTACCGGATCTTGCTATTTGGGTGCCTTTTGCCGATGAAGATTGTTATAAGGGTTGCTTG
AGGAATAATTCCTGCATAGCTTATTCATACTACATAGGCATAGGATGCATGCATTGGGAA
GAAATCTTACTTGATGTTCAGAAATTCTCCACGGGCGGGGCAGATTTATTTGTTCGCCTT
TCGTACACTGAGCTTGATCAAAAGAGAGATATGAAAGTAGCCATTGGGATCATAGTACCA
GTAGGCTCAATAGTTCTTGCCATTTTTGGATACTTTTCCTGTAAATATTTAGCTAAGCAC
AGAGCAATGAGGAAAAAGAGTGAGCTCTTATTACGAGAATCATTGCCAAACTTCTACAAG
GAAAGCTTGGTTACAGATGACATCAACCAAGCTAAATTTGAAGAGCTACTTGTATACAAC
TTTGACATCTTAGCAAGTGCAACCGACAATTTTCACTTGTCTAGCAAGCTTGGGCAGGGA
GGTTTTGGTCCAGTTTACAAGGGAAAATTGCCAGAGGGAAAAGAAATTGCTGTGAAAAGG
CTTTCACAGTCTTCTGGTCAGGGGCTAGAGGAGTTTATGAATGAGGTTGTGGTGATTTCC
AAACTTCAACACCGTAATCTTGTTAAGCTCCTTGGCTGCTGCACAGAAAGAGGAGAGAAG
ATGCTGGTTTATGAATACATGCCAAAAAGAAGCTTAGATGCATATCTCTTCGGTTCAAAC
CCTGAAGAGAAAGAGTTCCTTGATTGGAGTAAACGTGTTATCATCATTGAGGGAATTGGT
CGAGGCCTTCTTTACCTTCACAGAGATTCAAGATTAAAGATTATTCACAGGGATTTGAAA
GCAAGCAACATTTTGTTGGATGAACAACTGAACCCGAAAATTTCAGATTTTGGCATGGCA
AGGATTTTTCCAGGCAACCAAGATCAGGCCAACACAGAGAGAGTTGTTGGTACCTATGGT
TACATGGCACCTGAATACGCAATGGAAGGAAGATTCTCAGAAAAATCAGATGTTTACAGT
TTCGGAGTTTTGTTACTGGAAATTATTAGTGGAAGGAGGAATACTAGCTTTCACCAAGAT
GACTGTGCCTTAAGCCTTCTAGCATGTGCATGGAAGTGTTGGAACGAAAATAACATTGTC
GAATTGGTTGACCCCAAGATAATAGACATGCAGTTTGAAAGGGAAATTCTGAGGTGTGCA
CATGTTGGACTATTATGTGTTCAAGAATATGCAGAAGATAGACCAAATGTTTCGGTGGTT
CTGTCTATGCTCACTAGTGAAATTTCTGATTTGCCAAGTCCTAAACAACCTGCATTTACA
ACAAGACCGAGCTGTTCCAAGAAGGAATCTTCTAAAACTCAAGGCTCTGTGAACACAGTT
AGCATTACTATTATGGAAGGACTAATGAAGCTAAGTTGTAAGAAGATTTTTCTTTGGCAC
GCTGTTCTTGTTCTGTTTTTTCATATAGCAAATGCTTTATCAGACACCATTAGTATCAAT
CAATCTCTGAGTGGTTCAGAAACTTTAGTTTCCAAAAATAACATATTCATATTGGGATTT
TTTAGTCCTGAGAATTCGACGAATCGTTATGTTGGTATTATGTTTAATACCCAATCACAA
AGTGTTGTATGGGTAGCCAACAGAGACAGTCCTTTACAAGATTCTAGTGGAAGAATAACT
ATATCAGAAGGTGGAAATCTTGTAATCTTGAATGCACAGAAGAAGAGTATTTGGTCATCC
AATATTTCAACAGCTGTGAGAAATACTACTGCCCAGCTCTCAGATACTGGAAACTTAGTT
TTGAAAGACAGCTCCAGTGGGAGAACTCTATGGGAAAGTTTTAGTGATCTTTCAGATTCT
TTCTTGCAGTACATGAAGCTTGGCAGCGATAAGAGTACTAACACGACGAATCTGCTGAAA
TCATGGAGAAGTCCCTTAGATCCTTCTGATGGGAGTTTCTCAGCTGGAATTCAACCTGAA
ACCATTCCCCAAATTTTCATATGGAAGAATGGCTTACCTCATTGGCGTAGCGGTCCATGG
AATAAACAGATTTTCATTGGAGTACCAGAAATGACTTCTTTCTATTTCAGTGGATTTGAG
CTAGTAAATGACAACATGGGTACTGCCTACTTCTCCTATACATATTCAGATCAAGATGAT
GGGATGCTCTACTTAGTCTTGAACTCAACTGGATTTTTGCAGCAAAAAGAACTATATGAT
AGGAAGAATGACTGGACCGTAACATGGGCAACCCCTGCAAATGAGTGTGATTTTTATGGA
AAGTGTGGGCCTTATGGAAGCTGCGATCCTAATAGTTCACCAATTTGCACTTGTTTGCAA
GGGTTTAAACCAAAAAGTCAAGAAGAATGGGGAAAAGGAAACTGGACCAATGGATGCATC
AGAAAGACTGCATTAGAGAATGAAAGAAACAACTCCAACATTGAGCAAGGTAAGCAAGAT
TGGTTTTTGAGGCTGCAGTCAATGAAAGTTCCGGATTCCGCTATTTGGGTATCTTTGGAT
GAAGAAGATTGTGAAAGTGGTTGCTTGAGGAATTTTTCCTGCATAGCTTATTCATACTAC
ATAGGCATAGGATGCATGCATTGGGAAGGAATCTTACTTGATGTTCAGAAATTCTCCACG
GGCGGGGCAGATTTATTCATTCGTCTTTCGTACACTGAGCTTGATCAAAAGAAAGATATT
AAAGTAGCCATTGGGATCGTAGTACCAGTAGGCTCAATAGTTCTTGCCATTTTTGGATAC
TTTTCATGTAAATATTTGGCTAAGCACAGAGCAAGGAAGAAAAAGAGTGAGCTCTTATTA
AGAGAATCATTGCCAAACTTCTACAAGGAAAGCATGGTTACAGATGACATCAACCAAGCT
AAATTTGAGGAGCTGCCGTTATACAACTTTGACATGCTAGCAAATGCAACTGACAACTTT
CACCTCTCTAGCAAGCTTGGGCACGGTGGTTTCGGTACAGTTTACAAAGGACAATTGCCA
GAGGGACAAGAAATTGCTGTGAAAAGGCTTTCACAGTCTTCTGGCCAGGGGCTAGAGGAG
TTTATGAATGAGGTGGTGGTGATTTCCAAACTTCAACACCGTAATCTTGTTAGACTCCTT
GGCTGCTGCATAGAAAGAGGGGAGAAGATGCTGGTTTATGAATTCATGCCAAAAAGAAGC
TTGGATGCCTATATCTTTGGTTCACACCTGGAAGCAGAAGACTTCCTTGATTGGAGTAAA
CGTGCAATCATCATTGAGGGAATTGGTCGAGGCCTCCTTTACCTTCACAGGGATTCAAGA
CTAAGGATTATCCACAGGGATTTGAAGGCAAGCAACATTTTGTTGGATGAATACCTGAAC
CCCAAAATTTCAGATTTTGGCATGGCAAGGATTTTTTCAGGCAACCAAGATCAGGCCAAT
ACAAGTAGGGTTGTTGGAACCTATGGCTATATGGCACCTGAATATGCAATGGAAGGAAGA
TTCTCAGAAAAATTAGATGTTTACAGTTTCGGAGTTTTATTATTGGAAATTATAAGTGGA
AGGAGGAACACTAGCTTTCACCAAGATGATTGTGCAATAAGCCTTCTAGCATATGCATGG
AAGCGTTGGAACGAAAACAAGATAGTCGAATTGGTTGACCCCAAGATAATTGACCTGCAG
CTCGAGAAGGAAATTCTAAGATGTGTACATGTTGGACTATTGTGCGTACAAAAATATGCA
GAAGACAGACCAAATGTCTCCACAGTTTTGTCTATGCTCACCAGGGAAATTGCTGATTTA
CCAAGTCCTAAACAACCTGCATTTACAACAGGACCAAGCTGTTCCAATAAAGATTCCTGT
AGAACTCAAGGCTCTGTCAACACCGTTAGCATTACTACTATGGAAGGACGATAG

Peptide Sequence

PEP ID

XP_016447527.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107772540 [Nicotiana tabacum]
Sequence

MKLSTRKILLFRVVLVLVFYIANASDTISTNKSLQDSETLVSNDKRFIFGFFSPENSTNR
YVGIMFNIQSSTVVWVANRDNPLQDSSGSVTISEDGNLVILNAQKKSIWSSNISTAVRNS
TAQLLDNGNLELKDSSSGMVLWESFRDPSDSFLQYMKIGVDKSTNTTNLLKSWKSPSDPS
AGSFSAGIQPETVPQIYIWKNGRLPHWRSGPWNKQIFIGIPDMTSFYLNGFDLVNDNKGT
AYLSFLYANQAEIAYFTLNSTGFLHQKYLDPKKNDWEVTWESQVSECDFYGKCGPFGSCD
PRSSPICSCLDGFKPKSEEEWRKGNWTGGCLRKSMLESERNNSNIEQGKQDWFLKLQSMK
VPDLAIWVPFADEDCYKGCLRNNSCIAYSYYIGIGCMHWEEILLDVQKFSTGGADLFVRL
SYTELDQKRDMKVAIGIIVPVGSIVLAIFGYFSCKYLAKHRAMRKKSELLLRESLPNFYK
ESLVTDDINQAKFEELLVYNFDILASATDNFHLSSKLGQGGFGPVYKGKLPEGKEIAVKR
LSQSSGQGLEEFMNEVVVISKLQHRNLVKLLGCCTERGEKMLVYEYMPKRSLDAYLFGSN
PEEKEFLDWSKRVIIIEGIGRGLLYLHRDSRLKIIHRDLKASNILLDEQLNPKISDFGMA
RIFPGNQDQANTERVVGTYGYMAPEYAMEGRFSEKSDVYSFGVLLLEIISGRRNTSFHQD
DCALSLLACAWKCWNENNIVELVDPKIIDMQFEREILRCAHVGLLCVQEYAEDRPNVSVV
LSMLTSEISDLPSPKQPAFTTRPSCSKKESSKTQGSVNTVSITIMEGLMKLSCKKIFLWH
AVLVLFFHIANALSDTISINQSLSGSETLVSKNNIFILGFFSPENSTNRYVGIMFNTQSQ
SVVWVANRDSPLQDSSGRITISEGGNLVILNAQKKSIWSSNISTAVRNTTAQLSDTGNLV
LKDSSSGRTLWESFSDLSDSFLQYMKLGSDKSTNTTNLLKSWRSPLDPSDGSFSAGIQPE
TIPQIFIWKNGLPHWRSGPWNKQIFIGVPEMTSFYFSGFELVNDNMGTAYFSYTYSDQDD
GMLYLVLNSTGFLQQKELYDRKNDWTVTWATPANECDFYGKCGPYGSCDPNSSPICTCLQ
GFKPKSQEEWGKGNWTNGCIRKTALENERNNSNIEQGKQDWFLRLQSMKVPDSAIWVSLD
EEDCESGCLRNFSCIAYSYYIGIGCMHWEGILLDVQKFSTGGADLFIRLSYTELDQKKDI
KVAIGIVVPVGSIVLAIFGYFSCKYLAKHRARKKKSELLLRESLPNFYKESMVTDDINQA
KFEELPLYNFDMLANATDNFHLSSKLGHGGFGTVYKGQLPEGQEIAVKRLSQSSGQGLEE
FMNEVVVISKLQHRNLVRLLGCCIERGEKMLVYEFMPKRSLDAYIFGSHLEAEDFLDWSK
RAIIIEGIGRGLLYLHRDSRLRIIHRDLKASNILLDEYLNPKISDFGMARIFSGNQDQAN
TSRVVGTYGYMAPEYAMEGRFSEKLDVYSFGVLLLEIISGRRNTSFHQDDCAISLLAYAW
KRWNENKIVELVDPKIIDLQLEKEILRCVHVGLLCVQKYAEDRPNVSTVLSMLTREIADL
PSPKQPAFTTGPSCSNKDSCRTQGSVNTVSITTMEGR

Transcript Sequence

Gene sequence data has not been registered.